Index

---

Numerics

---

¹³C, ¹H shifts, estimating 121

35 mm Slide Boundary lines 152

3D models 116

3D Query Properties 131

A

---

Abnormal Valence 128

Abnormally shaped arrows, creating 86

Absolute flag, drawing 134

ACS Document 1996 202

Actual Size command 153

ACX information, finding 175

Acyclic Chain Tool, description 6

Acyclic chains

adding 1

length 1

Add

3D query property 1

chemical names 1

column to template 1

row to template 1

to selection 1

Add Frame 82

Aligning objects

Align Submenu 1

overview 1

rulers 1

with crosshair 1

Aligning Structures 22

Alternative Groups

attachment point numbering 1

attachment point symbol 1

Attachment Rank indicators 1

defining 1

description 1

multiple attachment points 1

Always Display and Print Atom Mapping 143

Analysis

information 1

messages 1

Analysis window 9

Anion, drawing 79

Anonymous Alternative Groups 142

Apply Settings command 11

Arc Tool

description 1

using 1

Arcs

drawing 1

resizing 1

arcs 82

Arrow Tool

description 1

overview 1

palette 1

Arrows

autoscaling 1

created with curves 1

resizing 1

Aspect Ratio, changing 96

Assigning

atom mapping 1

structures to spectra 1

Atom

moving 1

numbering 1

query properties 1

Atom Label text boxes, closing 61

Atom Labels

automatic justification 1

creating 1

deleting 1

editing 1

justification 1

layering 1

margin width 1

multi-attached 1

overview 1

repeating 1

specification 1

text boxes, creating new line 1

white space 1

Atom Numbering

editing 1

hiding 1

position 1

showing 1

Atom properties

abnormal valence 1

description 1

implicit hydrogens 1

in query structures 1

reaction changes 1

reaction stereo 1

resetting defaults 1

ring bond count 1

substituents 1

unsaturation 1

viewing 1

Atom-To-Atom Mapping 143

Attachment Point

defining 1

multiple 1

numbering 1

symbol 1

Attachment point

tool 1

Attachment Point Tool 140

Attachment Rank indicators, showing 142

Automatic

drawing of structure 1

error checking 1

justification, atom labels 1

Mapping 1

Autosave 13

Autoscale

bonds 1

empty document window 1

template color 1

when transferring 1

B

---

Background color, printing 16

Baseline style, captions 62

Benzene Ring

changing orientation 1

drawing 1

Benzene Ring Tool 52

Bezier curves 83

Bitmapped

Fonts 1

printing quality 1

Boiling Point

calculation 1

definition 1

Bold Bond Tool icon 49

Bold Wedge Bond Tool icon 49

Bold Width 48

Bond crossings

changing 1

white space 1

Bond order, changing 58

Bond Properties

defining 1

descriptors 1

reaction center 1

removing 1

topology 1

types 1

viewing 1

Bond query indicators 129

Bond Spacing, description 47

Bond tool

description 1

icons 1

repeating a label 1

Bonds

adding 1

autoscaling 1

changing bond type 1

changing type 1

double either 1

drawing 1

drawing by clicking 1

editing 1

Fixed Length 1

layering 1

margin width 1

multi center attachment 1

orientation, changing 1

orientation, dative bond 1

orientation, wedge bond 1

quadruple 1

selecting 1

types 1

Border of page 149

Boxes

drawing 1

rotating 1

Braces 82

Bracket

usage 1

Brackets

description 1

drawing 1

paired 1

setting properties 1

single 1

tool 1

using to represent polymers 1

Bring to Front command 156

Bruker JCAMP file format 169

C

---

Calculating

chemical properties 1

elemental analysis 1

exact mass 1

formula 1

Molecular Weight 1

CambridgeSoft web site, accessing 176

CambridgeSoft.com 176

Can. J. Chem. Document 202

Caption text boxes

closing 1

creating new line 1

Captions

Analysis information 1

autoscaling 1

coloring 1

converting to structures 1

creating 1

creating tables 1

editing 1

formula 1

inserting from structure 1

inserting rows in tables 1

justification 1

setting Font, Size and Styles 1

subscript 1

superscript 1

Table column spacing 1

text overview 1

width 1

Carbon-13 shifts, see ¹³C, ¹H shifts, estimating

Cation, drawing 79

CCITT Group 3 and 4 171

CD Template 167

cds format 167

cdx

file format 1

saving as 1

cdxml format 167

Center on Page command 155

Centering objects 155

Chain Angle, description 47

Changing

aspect ratio 1

Bond orientation 1

bond type 1

default settings 1

perspective 1

settings when transferring 1

tolerance 1

Character Map 10

Charges

specifications 1

symbols, drawing 1

Check Structure

overview 1

when copying 1

Checking Chemistry 113

Chem3D 116

Chem3D objects, caution when sharing files 167

ChemClub.com 177

ChemDraw

2.x file format 1

3.5 file format 1

cdx format 1

closing 1

ctp, ctr file formats 1

customizing 1

HotKeys File 1

Nicknames 1

ChemDraw Items folder

description 1

Hotkeys 1

isotope table 1

moving 1

nicknames 1

Open Special 1

overview 1

scripts 1

style sheets and stationery pads 1

templates 1

window menu 1

ChemDraw Laser Prep 17

ChemFinder.com 175

Chemical name, structure from 59

Chemical properties

calculating 1

ChemProp/Draw 1

Chemical Properties window 9, 117

Chemical Symbols

palette 1

rotating 1

tool 1, 2

Chemical syntax checking 58

Chemical Warnings

overview 1

suppressing 1, 2

Chemically significant text 181

Chemicals, purchasing online 176

Chemistry

checking 1

of ChemDraw 1

ChemNews.Com 176

ChemNMR

using 1

ChemOffice SDK, accessing 177

ChemProp/Draw

calculations 1

description 1

using 1

ChemStore.com 176

chm files 167

CIP Rules 184

Clearing

mapping 1

spectrum-structure assignments 1

stereochemical markers 1

Click to select objects 90

Clipboard 161

Check Structure 1

copy 1

cutting 1

moving objects 1

pasting 1

Clipping files 163

CLogP 118

Closed Brackets, rotating 81

Closed style, shapes 85

Closing

caption text box 1

ChemDraw 1

documents 1

CMR 118

CMYK, Planar and Contiguous 168, 171

Color

autoscaling 1

menu 1

overview 1

saving settings 1

Color dialog box 108

Color Palette 108

Coloring

captions 1

objects 1

Column spacing 159

Compression 171

Connection Table

example file 1

file format 1, 2

Contract label 102

Conventions 3

Convert name to structure, limitations 59

Convert structure to name, automatic captions 67

Converting

captions to structure 1

name to structure 1

to 3D 1

Copy

and Check Structure 1

As SLN command 1

As SMILES command 1

duplicating objects 1

objects 1

with Clipboard 1

with drag and drop 1

Creating

atom labels 1

HotKeys 1

mirror images 1

new document 1

SLN strings 1

tables 1

templates 1

text 1

Critical Pressure

calculation 1

definition 1

Critical Temperature

calculation 1

definition 1

Critical Volume

calculation 1

definition 1

Crosshair

displaying 1

moving 1

using to align objects 1

CT file format 167

CTP file format 167

CTR file format 167

CTS file format 171

Curves

autoscaling 1

for creating arrows 1

segment, deleting 1

Custom templates 111

Customized settings, saving 11

Customizing

ChemDraw 1

saving document settings 1

using Scripts 1

Cut

objects 1

Cycloalkane rings, converting to delocalized rings 54

Cyclohexane Chair Ring Tool

description 1

orientation 1

Cyclohexane Ring Tool 52

Cyclooctane Ring Tool 52

Cyclopentadiene Ring Tool 52

Cyclopentadiene Ring, changing orientation 54

Cyclopentadiene rings, drawing 54

Cyclopentane Ring Tool 52

Cyclopropane Ring Tool 52

D

---

Daggers 82

Dashed Bond Tool icon 49

Databases

support for query structures 1

supported 1

Dative Bond

drawing 1

Tool icon 1

Default

atom properties, resetting 1

bond properties, resetting 1

changing 1

document location 1

file format 1

save file format 1

Stationery pad 1

Defined Nickname 100

Deflate compression 171

Delete Column, from template 112

Delete Row, from template 112

Deleting

atom labels 1

Backspace key 1

curve segment 1

Delete key 1

Nicknames 1

objects 1

Pen tool shapes 1

Delocalized rings, drawing 54

Deselecting objects 91

Detecting errors

Automatic error checking 1

Check Structure command 1

Disable chemical warnings 19, 58

Discarding changes 14

Displaying

atom mapping 1

cross hairs 1

entire page 1

reaction mapping 1

rulers 1

Distorting objects 96

Distributing Objects 155

Distributing objects 155

Document

location, default 1

multi-paged 1

posters 1

reverting to last saved 1

saving 1

settings 1

Stationery pad settings 1

Document Settings, overview 11

Document Setup

multiple-paged documents 1

Posters 1

Document window

drawing area 1

enlarging 1

orientation 1

reducing 1

Documentation web page 176

Double bond

changing type 1

drawing 1

orientation 1

Double either bonds, drawing 50

Drag and drop 162

Drawing

acyclic chains 1

Arcs 1

bonds by clicking 1

boxes 1

charge symbols 1

cyclopentadiene rings 1

double bonds 1

double either bonds 1

dz2- orbitals 1

fixed length bonds 1

free sites 1

H-Dash Symbol 1

H-Dot Symbol 1

mirror images 1

orbitals 1

quadruple bonds 1

radicals 1

resonance delocalized rings 1

rings 1

rings with fixed length 1

sigma orbitals 1

single bonds 1

s-orbitals 1

stereochemical symbols 1

structure automatically from name 1

triple bonds 1

with templates 1

Drawing area 149

Drawing daggers 82

Drawing Elements

autoscaling 1

color 1

distorting 1

fill patterns 1

resizing 1

rotating 1

Drawing Elements Tool 6

Drawing settings

changing defaults 1

Fixed Angles 1

margin width, effect on atom labels 1

margin width, effect on bond crossing 1

Duplicating

labels 1

objects 1

dx file format 169

dz2- orbitals, drawing 77

E

---

Editing

atom labels 1

atom numbers 1

bond orientation 1

bond type 1

bonds 1

captions 1

generic nickname file 1

query indicators 1

Element

list 1

not-list 1

recognized 1

Elemental Analysis

caption 1

description 1

Encapsulated PostScript, see EPS file format

Enclosing objects 82

Enlarge

document window 1

page size 1

EPS file format

overview 1

Text 1

Eraser Tool 6

Eraser Tool, changing bond order with 58

Error checking 58

Error Messages 186

Exact Mass

caption 1

definition 1

Exiting 18

Expanding labels 102

Exporting

checking structure 1

compatibility 1

mapping 1

PNG 1

query properties 1

query structures 1

TIFF 1

using file formats 1

F

---

FAQs

online, accessing 1

Technical Support 1

File Format

Stationery pad 1

File format

cdx 1

cdxml 1

ChemDraw 1

ChemDraw 3.5 1

ChemDraw Stationery 1

Connection Table 1

connection table 1

CT 1

CTP 1

CTR 1

cts 1

EPS (TEXT) 1

GIF 1

ISIS 1

ISIS/Reactions 1

JDX 1

MDL MolFile 1

MDL RGFile 1

MSI MolFile 1

native 1

PICT 1

PICT scaled 4x 1

PNG 1

rxn 1

SMD 1

SPC 1

Template 1

TGF 1

TIF 1

TIFF 1

TPL Style sheet 1

Fill patterns, orbital tool 75

Filled style, shapes 85

Fit to Window 153

Fixed Angles

bonds 1

orbitals 1

toggling on/off 1

Fixed Lengths

bonds 1

description 1

drawing with 1

scaling 1

toggling on/off 1

Flags, stereochemical. See Indicators

Flatten command 94

Flip Horizontal command 95

Flip type 139

Flip Vertical command 95

Flush Left justification 63

Flush Right justification 63

Font

imaging speed 1

new captions 1

substitution 1

Footers, creating 150

Format

atom labels 1

text 1

Formula command

description 1

using 1

Free Energy

calculation 1

definition 1

Free Sites

drawing 1

in queries 1

Freezing Point, calculation 190

Front to Back ordering 156

Fusing templates 110

G

---

G Groups 139

Galactic Industries file format 170

Generic Groups 139

Generic Nicknames

description 1

editing file 1

Getting Started Tutorial 19

Gibbs Free Energy

calculation 1

definition 1

GIF format 168

GRAMS software 170

Graphical User Interface 5

Grouping

orbitals 1

using 1

Grouping Objects 98

Groups

Integral 1

GUI, see Graphical User Interface

H

---

Hard Coded HotKeys 70

Hash Spacing, description 48

Hashed Bond Tool icon 49

Hashed Wedge Bond tool icon 49

H-Dash Symbol, drawing 78

H-Dot and H-Dash, specification 183

H-Dot Symbol, drawing 78

Headers, creating 150

Heat of Formation

calculation 1

definition 1

Help

Windows 1

Henry's Law, definition 118

Hide Crosshair command 155

Hide Rulers command 154

Hiding

Atom Numbering 1

palettes 1

High resolution

non-PS printing 1

printing 1

Highlight box

selecting 1

size 1

Hollow Wedge Tool icon 49

Home page, CambridgeSoft 176

Hotkeys

Creating 1

File 1

Hard-coded 1

labeling by pointing 1

labeling multiple atoms 1

labeling the last atom drawn 1

labeling with a selection tool 1

overview 1

table of 1

How to use this guide 2

Hydrogens, implicit 125

Hyphens, Font submenu 62

I

---

Ideal Gas Thermal Capacity, calculation 190

Implicit Hydrogens 125

Imported objects, selecting 90

Imported Picture 167

Importing

spectral data 1, 2

using file formats 1

Include ChemDraw LaserPrep 165

Indicators

Atom Numbering 1

query 1

query, editing 1

query, positioning 1

1

stereochemistry 1, 2

stereochemistry, positioning 1

Indicators, stereochemical 134

Info window 9

Insert Name as Structure 59

Inserting

name as structure 1

rows in tables 1

Integral Groups, Creating 98

Interface 5

Internet, CambridgeSoft web site 176

IR spectra, see spectra

ISIS

Reactions 1

SKC file format 1

TGF file format 1

Isotopes

specifications 1

Isotopes Table 128

isotopes text file 128

J

---

J. Mol. Mod.

(1 Column) 1

(2 Column) 1

JCAMP file format 169

JDX file format 169

Joback's Fragmentation Method 190

Joining

structures 1

Joining Objects 97

Justification

atom labels 1

captions 1

K

---

Kekule structures 54

L

---

Lab supplies, purchasing online 176

Labels

contracting 1

expanding 1

Landscape page orientation 151

Lasso tool

selecting objects 1

toggling with Text Tool 1

Layering

atom labels 1

objects 1

Layout, page 149

Lewis dot symbol, see Lone Pair Symbol

Ligand, defined 184

Limitations, name-to-structure 59

Line Width 48

Lines, drawing 81

Link nodes 136

List Nicknames command 101

LogP

calculation 1

Lone Pair Symbol 78

M

---

m/e, displaying 114

Magnifying

with Magnification control 1

with View menu 1

Make Spectrum-Structure Assignment 120

Manual Mapping

clearing 1

overview 1

Mapping

atom 1

automatic 1

clearing 1

exporting 1

manual 1

reaction 1

Margin Width

adjusting 1

description 1

effect on Bond crossings 1

specifying 1

Margin width, specifying 69

Marquee tool 89

Mass Fragmentation Tool 119

Mass spectra

importing as JDX 1

importing as SPC 1

mass/charge, displaying 114

Maximize objects 152

MDL MolFile 169

MDL RGFile 169

Melting Point, definition 118

Message Area

display of fixed angles 1

Messages

analysis 1

status 1

Mirror images, creating 95

mol 169

mol file format 169

Molar refraction index

how calculated 1

Molecular Design Limited, see MDL

Molecular mass, definition 114

Molecular Simulations MolFile 170

Molecular Weight

caption 1

definition 1

how calculated 1

Monochrome 168, 171

Moving

atoms, bond tool 1

atoms, Selection Tool 1

crosshair 1

in tables 1

objects 1

MS, see spectra

MSI MolFile format 170

Multi-attached atom labels command 103

Multi-Center Attachments

command 1

overview 1

Multiple Attachment Points 141

Multiple Bond tool 50

Multiple bonds tool 6

Multiple Undo 13

Multiple-paged documents, setup 149

N

---

Name

inserting as structure 1

of structure, inserting 1

Name to structure

converting 1

limitations 1

paste special 1

with German names 1

Name, automatic structure from 59

Native file format 14

New Color Button 108

New Command 12

New document 12

New Slide 202

New Template, creating 111

Nicknames

defining 1

deleting 1

generic 1

overview 1

troubleshooting 1

nicknames.dat 99

NMR, see ChemNMR, Spectra

Non-PostScript printing

high resolution 1

Macintosh 1

Normal Boiling Point 190

Normal view 153

Numbering atoms 72

O

---

Object

Add Frame 1

Align 1

Distribute 1

Group 1

Join 1

Ungroup 1

Objects

aligning 1

centering 1

deleting 1

Distributing 1

distributing 1

grouping 1

joining 1

moving 1

ordering 1

reflecting 1

selecting all 1

ungrouping 1

using crosshair with 1

using rulers with 1

Online Help, see Help

Online Menu

Browse ChemStore.com 1

CambridgeSoft Home Page 1

ChemOffice SDK 1

CS Chem3D Technical Support 1

Lookup Suppliers on ChemStore.com 1

Register online 1

Open command 13

Open Special command 13

Orbital Tool

description 1

fill patterns 1

Fixed Angle 1

overview 1

Orbitals

drawing 1

grouping 1

type 1

Ordering objects 156

Orientation

Benzene Ring Tool 1

Cyclohexane Chairs 1

Cyclopentadiene Ring Tool 1

double Bond 1

of page 1

rings 1

templates 1

user-defined templates 1

Original view 153

Overlap, multipaged documents 150

P

---

Packbits, compression 171

Page

border 1

layout 1

orientation 1

overlap 1

setup 1

Page Definition Language

PostScript 1

QuickDraw 1

Page Setup

page layout 1

saving settings 1

Paged documents 149

Paired brackets 82

Palette

Arcs 1

Brackets 1

Chemical Symbols 1

color 1

Multiple bonds 1

orbital tools 1

Query tools 1

single bonds 1

Palettes

showing 1

tearing off 1

Paper Size 151

Parentheses 82

Paste

Duplicating objects 1

objects 1

Paste Special

name as structure 1

SMILES 1

Pen Tool 6

Pen tool shapes

deleting segments 1

selecting 1

Periodic Table 9

Perspectives, changing 152

PICT file format 170

PICT scaled 4x file format 170

Picture Layers

atom labels 1

Plain style, shapes 86

PNG file format 170

Polymers

flip type 1

repeat pattern 1

source-based 1

structure-based 1

Portrait page orientation 151

Positioning

atom number indicators 1

crosshair 1

objects 1

query indicators 1

rulers 1

stereochemistry indicators 1

using the Clipboard 1

Posters, setup 150

PostScript

commands 1

EPS (TEXT) 1

print quality 1

printing 1

Preferences

Check Structure 1

drawing, see Drawing Settings 1

highlight box 1

Include ChemDraw LaserPrep 1

Include PostScript 1

Initialize PostScript Printer 1

overview 1

print 1

require CTRL+ENTER 1

require Option+Return 1

text, see Text Settings 1

Use Bitmap Fonts When Available 1

Print Quality 17

Printing

atom mapping 1

background color 1

ChemDraw Laser Prep 1

drawing elements fill 1

effect of PostScript commands 1

high-resolution non-PostScript 1

include PostScript 1

orientation (of page) 1

overview 1

page setup 1

paper size 1

PostScript atom labels 1

preferences 1

reaction mapping 1

Properties

atom in searching 1

atom, abnormal valence 1

atom, description 1

atom, implicit hydrogens 1

atom, query 1

atom, reaction changes 1

atom, reaction stereo 1

atom, resetting defaults 1

atom, ring bond count 1

atom, substituents 1

atom, unsaturation 1

atom, viewing values 1

bond 1

bond descriptors 1

bond types 1

bond, reaction center 1

bond, removing 1

bond, topology 1

bond, viewing 1

brackets 1

calculating 1

Proton shifts, see ¹³C, ¹H shifts, estimating

Q

---

Quadruple bonds 50

Queries

multiple rings 1

Queries, see searching

Query indicators

editing 1

overview 1

Query Properties

3D 1

Query properties

exported 1

overview 1

Query Structures

description 1

exporting 1

Query Tools palette 133

Quick Reference Card, description 3

QuickDraw

bitmapped image 1

print quality 1

Quitting 18

R

---

R Groups 139

Racemic flag, drawing 134

Radicals

drawing 1

specification 1

Reaction Atom-Atom Map Tool 143

Reaction Atom-To-Atom Mapping 143

Reaction center 131

Reaction Changes 127

Reaction mapping

always display and print 1

automatic 1

clearing 1

exporting 1

manual 1

overview 1

Reaction Stereo 127

Red boxes on objects 58

Redo 14

Reduce

document window 1

object 1

page size 1

Reflection 95

Registration marks 150

Registration, online 177

Relative flag, drawing 134

Remove

colors 1

rulers 1

Remove Color button 108

Repeat command, rotations 94

Repeating a Label, bond tool 72

Repeating actions 13

Repositioning

atom number indicators 1

query indicators 1

stereochemistry indicators 1

Require

Ctrl+Enter to Create New Line in Atom Labels 1

Ctrl+Enter to Create New Line in Captions 1

Reset defaults

atom properties 1

bond properties 1

Resize Handle 95

Resizing

arcs 1

arrows 1

drawing elements 1

handle, double-clicking 1

objects 1

template panes 1

Resolution, TIFF 168, 171

Resonance Delocalized rings, drawing 54

Reversing actions 13

Revert command 14

RGB Indexed color 168, 171

RGFile format 169

Ring Bond Count 126

Ring pointer icon appearance 53

Ring Tool 7

Rings

drawing 1

drawing with fixed length 1

orientation 1

Rotate

chemical symbols 1

command 1

dialog box 1

drawing elements 1

objects 1

Rotating objects 93

Rotation

handle 1

of Objects 1

Rotation handle 93

RSC Document 202

Ruler Guides 153

Rulers

hiding 1

showing 1

RXN file format 169

S

---

Sample code, SDK web site 177

Save As command 15

Save command

default file format 1

using 1

Saving

a copy of a document 1

changes automatically 1

defaults 1

document 1

in different file formats 1

template documents 1

with different name or location 1

Saving customized settings 11

Scale

command 1

dialog box 1

Scaling

by a percentage 1

fixed length 1

objects 1

when Transferring information 1

Scripts menu 18

SDK Online, accessing 177

Searching

databases 1

export compatibility 1

online for chemical information 1

query properties supported 1

Select All command 91

Selecting

all 1

bonds 1

Lasso 1

last object 1

last tool 1

Marquee 1

Pen tool shapes 1

several objects 1

structures 1

Selection Rectangle

Resize handle 1

Rotation handle 1

Selection Tool

definition 1

deleting with Delete key 1

deselecting objects 1

distorting objects 1

highlight box 1

joining 1

Lasso 1

Marquee 1

selecting all 1

selecting several objects 1

using 1

Selection, adding to 91

Send to Back command 156

Set Color Button 108

Setting

margin width 1

preferences 1

Settings

document 1

highlight box 1

tolerance 1

Shaded style, shapes 86

Shapes

closed 1

filled 1

plain 1

shaded style 1

Sharing Information 161

Shift key, deselecting objects 91

Shortcuts, table of 193

Show Crosshair 154

Show Page 153

Show Rulers command 153

Show Stereochemistry 115

Showing

Atom Numbering 1

palettes 1

sigma orbitals, drawing 76

single bonds, drawing 49

Single brackets 82

skc format 168

SLN strings 162

SMD file format 170

SMILES

creating 1

overview 1

paste 1

viewing clipboard 1

SMIRKS, overview 161

s-orbitals, drawing 76

SPC file format 170

Spectra

assigning structures 1

exporting 1, 2

importing 1, 2

importing as JDX 1

importing as SPC 1

removing assignments 1

Spectrum-structure assignments

making 1

removing 1

viewing 1

Spiro linkage, templates 110

Squiggly Bond tool see Wavy Bond tool 49

Standard Molecular Data, see SMD

Stationery Pad

saving document settings 1

Stationery pad

Default 1

Document settings 1

file format 1

Page Setup settings 1

Stationery Pads

creating 1

provided 1

Status messages 186

Stereochemical Indicators 185

Stereochemical symbols, drawing 134

Stereochemistry

drawing mirror images 1

how calculated 1

indicators 1, 2

indicators, repositioning 1

removing markers 1

showing 1

terms supported 1

Struct=Name 67

Structure

3D perspective tool 1

automatic error checking 1

checking 1

CleanUp command 1

converting to name 1

Diagram Generation 1

from name 1

perspective tool 1

selecting 1

show stereochemistry 1

Structures

3D 1

Aligning 1

Style Sheets

color palette 1

Style, caption 62

Subscript command 62

Substituents 125

Superatom, ISIS 169

Superscript command 62

Supplier, finding online 175

Suppress chemical warnings 19, 58

Syntax Checking 113

Synthesis/Synlett Document 202

T

---

Table tool 156

Tables

column spacing 1

creating 1

creating with Table tool 1

inserting rows 1

moving in 1

Technical support 217

Template Panels 112

Template Tool

description 1

using 1

Templates

Autoscaling 1

coloring 1

creating 1

drawing with 1

file format 1

fusing 1

fusing with existing structure 1

orientation 1, 2

overview 1

panel 1

resizing 1

resizing template panes 1

reusing 1

saving template documents 1

spiro linkage 1

Text

atom label format 1

Atom label textbox 1

atom label, editing 1

atom labels, automatic justification 1

caption editing 1

caption, creating tables 1

coloring 1

creating 1

formatting 1

types 1

Text Box

closing 1

creating new line 1

Text Settings

captions, font, size, and style 1

changing defaults 1

Text Tool

atom labels 1

labeling atoms 1

toggling with lasso tool 1

Text tool 6

TGF file format 168

Thermal Capacity, calculation 190

TIFF

description 1

options 1, 2

resolution 1, 2

Tilting an object 96

Toggling

between tools 1

fixed length/fixed angle 1

text tool with lasso tool 1

Tolerance

effect on highlight box 1

setting 1

Tool

Alternative Group 1

Arrow 1

Reaction Atom-To-Atom Mapping 1

Templates 1

Text 1

Tools

Acyclic Chain 1

acyclic chain 1

Arc 1

arc 1

arrow 1

attachment point 1

benzene ring 1

bold bond 1

bold wedge bond 1

Bond 1, 2

Bracket 1

brackets 1

Chemical Symbol 1

chemical symbols 1

cyclohexane chair 1

cyclohexane ring 1

cyclooctane ring 1

cyclopentadiene ring 1

cyclopentane ring 1

cyclopropane ring 1

dashed bond 1

dative bond 1

Drawing Elements 1

drawing elements 1

eraser 1

hashed bond 1

hashed wedge bond 1

hollow wedge bond 1

Lasso 1

lasso 1

Marquee 1

marquee 1

mass fragmentation 1

multiple bond 1

Multiple bonds 1

Orbital 1

orbital 1

Pen 1

pen 1

Query 1

ring 1

Structure perspective 1

Table 1

template 1

Text 1

Trackball 1

wavy bond 1

Topology 131

TPL style sheet 171

Trackball tool 94

Transferring information

across platforms 1

keeping in scale 1

Triple bond, drawing 50

Troubleshooting

online 1

Technical Support 1

Tutorial 19

Types of bonds 180

U

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Undo 13

command 1

lost on save 1

Ungroup command 98

Ungrouping Objects 98

Unsaturation 126

Unspecified atom properties, in queries 125

Up to, in queries 125

Use Bitmap Fonts When Available 74

Use Defaults

atom properties 1

bond properties 1

Bracket properties 1

Preferences 1

User's guide, online 176

User-Defined Templates 111

Using the clipboard 92

V

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Variable attachment command 105

Viewing

analysis information 1

atom properties 1

bond properties 1

chemical properties 1

Spectrum-structure assignments 1

W

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Warnings, chemical 58

Web site, CambridgeSoft, accessing 176

Wedge Bond, drawing 51

What's New 1

White space, adjusting in atom labels 69

Window

analysis 1

chemical properties 1

Window menu

overview 1

stationery documents 1

Windows Help 3

WWW, technical support 217

Z

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Zooming, see Changing Perspectives